Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015846222.1_cds_XP_016509562.1_22484
CDS Infomation

[gene=LOC107827020] [db_xref=GeneID:107827020] [protein=calcium-dependent protein kinase 17-like] [protein_id=XP_016509562.1] [location=join(116622..117321,118078..118221,118867..119019,119251..119366,119567..119734,123104..123231,123359..123458,123982..124083)] [gbkey=CDS]
Sequence

ATGGGGAACTGTTGCTCAAGGGGCCAACCTGATAATGAACATACAAATAATAATGATCAT
ACTAGACAAAAATCCAATACCAAAAATGATCAATCAGTTTCAAATAATTCTCAACAACAA
CAAAATCATGGTTCAATTACACCACCAAAATCTCCTGATCCTTCTTCAAAACCATCAAAA
AATTCCCCTATAGGTCCAGTTTTAGGCAGACCAATGGAAGATGTTAGAAAAACATATTCT
ATAGGTAAAGAATTAGGGAGGGGTCAATTTGGTGTTACACATTTATGTACACACAAACAA
AGTGGTGAACAATTTGCATGTAAAACTATAGCAAAGAGGAAATTGGTTAATAAAGAGGAT
ATTGAAGATGTGAAGAGAGAAGTACAAATAATGCATCATTTAACAGGGCAACAAAATATT
GTGGAATTAAAAGGGGCATATGAAGATAAACATTCAGTGCATTTGGTTATGGAATTATGT
GCAGGTGGTGAACTTTTTGATAGAATTATTGCTAAGGGACATTATACTGAAAGGGCAGCT
GCAACTTTGTTAAGAACAATTGTGCAAATTGTACATACTTGTCATTCTATGGGAGTTATT
CATAGAGATCTTAAGCCTGAGAATTTCCTCCTACTTAATAAAGATGAAGATTCACCTCTC
AAGGCTACAGATTTTGGTCTTTCTGTATTCTACAAACAAGGAGATGTGTTTAAGGACATT
GTGGGTAGTGCATATTACATTGCACCTGAAGTCTTGAAAAGAAGATATGGTCCAGAAGTT
GATATATGGAGTGTGGGAGTTATGTTATATATTCTTCTTTCTGGTGTTCCTCCTTTTTGG
GCGGAAACTGAACATGGAATATTCAATGCAATATTGAGAGGACATATTGACTTTTCAAGT
GATCCATGGCCTGCAATTTCCCATGGTGCCAAAGATCTTGTCAAGAAGATGTTGACTATA
GACCCTAAGCAGAGGTTGACAGCAATCCAAGTCTTAAATCATCCATGGATCAAGGAAGAT
GGAGAAGCACCAGATACACCACTTGACAATGCTGTTTTGAGTAGGCTCAAACAATTTAGA
GCTATGAACAACTTCAAGAAAGTTGCTCTCCGGGTAATTGCAGGATGTCTATCAGAGGAA
GAGATTATGGGATTGATGCAAATGTTCAAAAGCATGGATACTGATAACAGTGGGGCAATA
ACACTTGAGGAGCTAAAACAAGGACTTGCCAAACAAGGCACAAAATTATCTGATTATGAG
ATTCAACAGTTAATGGAAGCTGCTGATGCTGATGGAAATGGAACCATAGATTATGAAGAA
TTTATTACAGCAACAATGCACATGAACAGAATGGACAAAGAAGAACATCTTTACACTGCA
TTCCAATATTTTGACAAGGATAATAGCGGGTACATTACAATAGAAGAGTTAGAGCAAGCT
TTAAGAGAATTTGGAATGACTGATGGAAAGGATATAAAGGAAATTGTTGCTGAAGTTGAC
TCTAATAATGATGGTCGAATCAACTATGAAGAGTTTGTAGCTATGATGAGAAAAGGAACT
CCAGAAACTGCAGCAAATCTAAAGAAAAGAAGGGAGTCATTTGTTGCATAA

Peptide Sequence

PEP ID

XP_016509562.1
PEP Infomation

PREDICTED: calcium-dependent protein kinase 17-like [Nicotiana tabacum]
Sequence

MGNCCSRGQPDNEHTNNNDHTRQKSNTKNDQSVSNNSQQQQNHGSITPPKSPDPSSKPSK
NSPIGPVLGRPMEDVRKTYSIGKELGRGQFGVTHLCTHKQSGEQFACKTIAKRKLVNKED
IEDVKREVQIMHHLTGQQNIVELKGAYEDKHSVHLVMELCAGGELFDRIIAKGHYTERAA
ATLLRTIVQIVHTCHSMGVIHRDLKPENFLLLNKDEDSPLKATDFGLSVFYKQGDVFKDI
VGSAYYIAPEVLKRRYGPEVDIWSVGVMLYILLSGVPPFWAETEHGIFNAILRGHIDFSS
DPWPAISHGAKDLVKKMLTIDPKQRLTAIQVLNHPWIKEDGEAPDTPLDNAVLSRLKQFR
AMNNFKKVALRVIAGCLSEEEIMGLMQMFKSMDTDNSGAITLEELKQGLAKQGTKLSDYE
IQQLMEAADADGNGTIDYEEFITATMHMNRMDKEEHLYTAFQYFDKDNSGYITIEELEQA
LREFGMTDGKDIKEIVAEVDSNNDGRINYEEFVAMMRKGTPETAANLKKRRESFVA

Transcript Sequence

Gene sequence data has not been registered.